Reconstruction Data

Volume

We combined a publicly available atlas with a process of coordinate extraction and layer thickness estimation to reconstruct the volume of CA1. From the entire CA1, we can obtain subvolumes of particular interest, such as cylinders and slices, at any desired location.

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Volume
Coordinates
Volume

3D volume viewer

Related: Experimental data - Layer anatomy

Volume analysis

Coordinates

Due to its curvature and irregularities, the volume of CA1 is difficult to manipulate. For this reason, we define a coordinate system that follows the hippocampal axes (longitudinal, transverse, radial).

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